xyzc's blog

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Posted on In
Symbols count in article: 3.6k Reading time ≈ 3 mins.

问题

在使用Typora编写文章，并通过GithubAction自动生成部署时，发现插入图片路径转义上出现了问题。

我使用的是hexo install hexo-asset-image --save，但该插件早已achieved，所以需要修改部分逻辑。

相关版本

环境 版本
hexo 6.2.0
hexo-cli 4.3.1
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Posted on In
Symbols count in article: 3.9k Reading time ≈ 4 mins.

Simple_SSTI_1

题目描述

没有描述，题目描述与题目名称一致。

解决过程

首先进入环境，发现仅有一句话：

image-20231105014117763

F12查看元素，发现一具友好的注释

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<!-- You know, in the flask, We often set a secret_key variable.-->
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Posted on In
Symbols count in article: 7.9k Reading time ≈ 7 mins.

Problem Background

Sometimes we want to figure out whether the error rate of the nanopore sequencing is equalized with different nanopore channels.

So we need to group the sequenced data into different channels.

But due to the format of fastq file shown below, we cannot directly obtain the channel information of the specified sequence id with module Biopython(click to enter).

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Posted on Edited on In
Symbols count in article: 3.7k Reading time ≈ 3 mins.

Problems encountered on 26/09/2022

Problem Situation

When I tried to run baseLess, an error occured：

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Traceback (most recent call last):
  File "/home/zxy/anaconda3/envs/baseLess/bin/baseLess", line 11, in <module>
    sys.exit(main())
  File "/home/zxy/anaconda3/envs/baseLess/lib/python3.10/site-packages/baseLess/__main__.py", line 55, in main
    args.func(args)
  File "/home/zxy/anaconda3/envs/baseLess/lib/python3.10/site-packages/baseLess/db_building/build_db.py", line 44, in main
    tr = TrainingRead(f, normalization=args.normalization,
  File "/home/zxy/anaconda3/envs/baseLess/lib/python3.10/site-packages/baseLess/db_building/TrainingRead.py", line 74, in __init__
    self.raw = None
  File "/home/zxy/anaconda3/envs/baseLess/lib/python3.10/site-packages/baseLess/db_building/TrainingRead.py", line 163, in raw
    raw = self.hdf[f'Raw/Reads/{raw_varname}/Signal'][()]
  File "h5py/_objects.pyx", line 54, in h5py._objects.with_phil.wrapper
  File "h5py/_objects.pyx", line 55, in h5py._objects.with_phil.wrapper
  File "/home/zxy/anaconda3/envs/baseLess/lib/python3.10/site-packages/h5py/_hl/dataset.py", line 710, in __getitem__
    return self._fast_reader.read(args)
  File "h5py/_selector.pyx", line 366, in h5py._selector.Reader.read
OSError: Can't read data (can't open directory: /home/zxy/anaconda3/envs/baseLess/lib/hdf5/plugin)
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